BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 568e01 (181 letters) Database: /ddhome/ono/home/wk_watanabe/whitehead_blast/db/WH.db 1828 sequences; 1,091,843 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D10Rat17 115 3e-27 D13Rat45 30 0.14 D12Rat45 26 2.2 D5Rat210 26 2.2 D10Rat223 26 2.2 >D10Rat17 Length = 530 Score = 115 bits (58), Expect = 3e-27 Identities = 61/62 (98%), Positives = 61/62 (98%) Query: 1 aatataagaatattgctgatttttctaatgctggaaagtccaaataataatgcatctagt 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 194 aatataagaatattgctgattttgctaatgctggaaagtccaaataataatgcatctagt 253 Query: 61 ag 62 || Sbjct: 254 ag 255 Score = 87.7 bits (44), Expect = 7e-19 Identities = 44/44 (100%), Positives = 44/44 (100%) Query: 107 tacacatcacaacacgagaatggtatcagatggtagtaatatgc 150 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 tacacatcacaacacgagaatggtatcagatggtagtaatatgc 331 >D13Rat45 Length = 397 Score = 30.2 bits (15), Expect = 0.14 Identities = 15/15 (100%), Positives = 15/15 (100%) Query: 3 tataagaatattgct 17 ||||||||||||||| Sbjct: 231 tataagaatattgct 217 >D12Rat45 Length = 539 Score = 26.3 bits (13), Expect = 2.2 Identities = 13/13 (100%), Positives = 13/13 (100%) Query: 165 agtagaagcaaga 177 ||||||||||||| Sbjct: 235 agtagaagcaaga 247 >D5Rat210 Length = 392 Score = 26.3 bits (13), Expect = 2.2 Identities = 13/13 (100%), Positives = 13/13 (100%) Query: 17 tgatttttctaat 29 ||||||||||||| Sbjct: 226 tgatttttctaat 214 >D10Rat223 Length = 586 Score = 26.3 bits (13), Expect = 2.2 Identities = 13/13 (100%), Positives = 13/13 (100%) Query: 129 gtatcagatggta 141 ||||||||||||| Sbjct: 101 gtatcagatggta 113 Database: /ddhome/ono/home/wk_watanabe/whitehead_blast/db/WH.db Posted date: Feb 23, 1999 5:16 PM Number of letters in database: 1,091,843 Number of sequences in database: 1828 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 38 Number of Sequences: 1828 Number of extensions: 38 Number of successful extensions: 17 Number of sequences better than 10: 7 length of query: 181 length of database: 1091843 effective HSP length: 14 effective length of query: 167 effective length of database: 1066251 effective search space: 178063917 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 12 (24.3 bits)