BLASTN 2.0.5 [May-5-1998]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 877a09
         (369 letters)

Database: /ddhome/DDsys/GenDB/UniGeneMm/Mm.seq.uniq
           15,275 sequences; 15,836,343 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gnl|UG|Mm.19131 Mouse complement component C3 mRNA, alpha and b...    74  3e-13
gnl|UG|Mm.28764 AU016703 Mus musculus cDNA, 3' end /clone=J0728...    34  0.28
gnl|UG|Mm.27648 Mus musculus p190-B gene, complete cds /cds=(0,...    34  0.28
gnl|UG|Mm.8012 Mus musculus Ets transcription factor Spi-B, par...    34  0.28

>gnl|UG|Mm.19131 Mouse complement component C3 mRNA, alpha and beta
            subunits, complete cds /cds=(56,5047) /gb=K02782
            /gi=192278 /len=5087
            Length = 5087
            
 Score = 73.8 bits (37), Expect = 3e-13
 Identities = 87/104 (83%), Positives = 87/104 (83%), Gaps = 6/104 (5%)

                                                                        
Query: 15   cagaaacagtgcgaagacctcggggcattcacagaaacaatggtggttttcggctgcccc 74
            ||||||||||||||||| || ||||||||||||||| | ||||||||||  || || |||
Sbjct: 4983 cagaaacagtgcgaagaacttggggcattcacagaatctatggtggtttatggttgtccc 5042

                                                        
Query: 75   aactgaccaca------acctccaataaagcttcagttgtattt 112
            ||||||| |||       |||| |||||||||||||||||||||
Sbjct: 5043 aactgactacagcccagccctctaataaagcttcagttgtattt 5086


>gnl|UG|Mm.28764 AU016703 Mus musculus cDNA, 3' end /clone=J0728E11
           /clone_end=3' /gb=AU016703 /gi=3371707 /len=594
           Length = 594
           
 Score = 34.2 bits (17), Expect = 0.28
 Identities = 29/33 (87%), Positives = 29/33 (87%)

                                            
Query: 337 cctctaaactccctggggcttccggtctcttga 369
           |||||||||||||| |||| ||  |||||||||
Sbjct: 170 cctctaaactccctagggcctctagtctcttga 202


>gnl|UG|Mm.27648 Mus musculus p190-B gene, complete cds /cds=(0,4505)
            /gb=U67160 /gi=1762974 /len=4506
            Length = 4506
            
 Score = 34.2 bits (17), Expect = 0.28
 Identities = 20/21 (95%), Positives = 20/21 (95%)

                                 
Query: 306  attccatactcactccaccca 326
            |||||||| ||||||||||||
Sbjct: 4033 attccatattcactccaccca 4053


>gnl|UG|Mm.8012 Mus musculus Ets transcription factor Spi-B, partial
            cds /cds=(0,298) /gb=U87620 /gi=2735134 /len=2276
            Length = 2276
            
 Score = 34.2 bits (17), Expect = 0.28
 Identities = 17/17 (100%), Positives = 17/17 (100%)

                             
Query: 275  tcccctcccggccaccc 291
            |||||||||||||||||
Sbjct: 2170 tcccctcccggccaccc 2154


  Database: /ddhome/DDsys/GenDB/UniGeneMm/Mm.seq.uniq
    Posted date:  Feb 17, 1999  1:37 AM
  Number of letters in database: 15,836,343
  Number of sequences in database:  15,275
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2606
Number of Sequences: 15275
Number of extensions: 2606
Number of successful extensions: 698
Number of sequences better than 10: 16
length of query: 369
length of database: 15836343
effective HSP length: 16
effective length of query: 353
effective length of database: 15591943
effective search space: 5503955879
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 25 (49.6 bits)
S1: 0 ( 0.5 bits)
S2: 15 (30.2 bits)