BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 822c04 (392 letters) Database: /ddhome/DDsys/GenDB/UniGeneMm/Mm.seq.uniq 15,275 sequences; 15,836,343 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Mm.26007 AU016817 Mus musculus cDNA, 3' end /clone=J0730... 80 6e-15 gnl|UG|Mm.19793 AU015167 Mus musculus cDNA, 3' end /clone=J0708... 80 6e-15 gnl|UG|Mm.19683 AU023567 Mus musculus cDNA, 3' end /clone=J0434... 80 6e-15 gnl|UG|Mm.28273 AU015135 Mus musculus cDNA, 3' end /clone=J0708... 80 6e-15 gnl|UG|Mm.28267 AU016586 Mus musculus cDNA, 3' end /clone=J0727... 80 6e-15 >gnl|UG|Mm.26007 AU016817 Mus musculus cDNA, 3' end /clone=J0730C06 /clone_end=3' /gb=AU016817 /gi=3371821 /len=579 Length = 579 Score = 79.8 bits (40), Expect = 6e-15 Identities = 55/60 (91%), Positives = 55/60 (91%) Query: 4 gatcactaattgagaaaatgccttacaggtgaatctcttgcaagcatttcctcaactgaa 63 |||||||||||||||||||||||||||| || ||||| || | ||||||||||||||||| Sbjct: 214 gatcactaattgagaaaatgccttacagttggatctcatggaggcatttcctcaactgaa 273 >gnl|UG|Mm.19793 AU015167 Mus musculus cDNA, 3' end /clone=J0708E12 /clone_end=3' /gb=AU015167 /gi=3369958 /len=577 Length = 577 Score = 79.8 bits (40), Expect = 6e-15 Identities = 55/60 (91%), Positives = 55/60 (91%) Query: 4 gatcactaattgagaaaatgccttacaggtgaatctcttgcaagcatttcctcaactgaa 63 |||||||||||||||||||||||||||| || ||||| || | ||||||||||||||||| Sbjct: 210 gatcactaattgagaaaatgccttacagttggatctcatggaggcatttcctcaactgaa 269 >gnl|UG|Mm.19683 AU023567 Mus musculus cDNA, 3' end /clone=J0434G07 /clone_end=3' /gb=AU023567 /gi=3393914 /len=559 Length = 559 Score = 79.8 bits (40), Expect = 6e-15 Identities = 55/60 (91%), Positives = 55/60 (91%) Query: 4 gatcactaattgagaaaatgccttacaggtgaatctcttgcaagcatttcctcaactgaa 63 |||||||||||||||||||||||||||| || ||||| || | ||||||||||||||||| Sbjct: 224 gatcactaattgagaaaatgccttacagttgtatctcatggaggcatttcctcaactgaa 283 >gnl|UG|Mm.28273 AU015135 Mus musculus cDNA, 3' end /clone=J0708B09 /clone_end=3' /gb=AU015135 /gi=3369926 /len=585 Length = 585 Score = 79.8 bits (40), Expect = 6e-15 Identities = 55/60 (91%), Positives = 55/60 (91%) Query: 4 gatcactaattgagaaaatgccttacaggtgaatctcttgcaagcatttcctcaactgaa 63 |||||||||||||||||||||||||||| || ||||| || | ||||||||||||||||| Sbjct: 225 gatcactaattgagaaaatgccttacagttggatctcatggaggcatttcctcaactgaa 284 >gnl|UG|Mm.28267 AU016586 Mus musculus cDNA, 3' end /clone=J0727A11 /clone_end=3' /gb=AU016586 /gi=3371590 /len=453 Length = 453 Score = 79.8 bits (40), Expect = 6e-15 Identities = 55/60 (91%), Positives = 55/60 (91%) Query: 4 gatcactaattgagaaaatgccttacaggtgaatctcttgcaagcatttcctcaactgaa 63 |||||||||||||||||||||||||||| || ||||| || | ||||||||||||||||| Sbjct: 225 gatcactaattgagaaaatgccttacagttggatctcatggaggcatttcctcaactgaa 284 Database: /ddhome/DDsys/GenDB/UniGeneMm/Mm.seq.uniq Posted date: Feb 17, 1999 1:37 AM Number of letters in database: 15,836,343 Number of sequences in database: 15,275 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3444 Number of Sequences: 15275 Number of extensions: 3444 Number of successful extensions: 962 Number of sequences better than 10: 57 length of query: 392 length of database: 15836343 effective HSP length: 16 effective length of query: 376 effective length of database: 15591943 effective search space: 5862570568 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 15 (30.2 bits)