BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 133g01 (346 letters) Database: /ddhome/DDsys/GenDB/UniGeneMm/Mm.seq.uniq 15,275 sequences; 15,836,343 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Mm.1881 mq56g06.x1 Mus musculus cDNA, 3' end /clone=IMAG... 36 0.066 gnl|UG|Mm.22396 vz27h11.r1 Mus musculus cDNA, 5' end /clone=IMA... 34 0.26 gnl|UG|Mm.1567 Murine phosphoprotein phosphatase mRNA, complete... 34 0.26 gnl|UG|Mm.28580 Mus musculus myotubularin (Mtm1) mRNA, complete... 34 0.26 gnl|UG|Mm.2950 Postmeiotic segregation increased 2 (S. cerevisi... 32 1.0 >gnl|UG|Mm.1881 mq56g06.x1 Mus musculus cDNA, 3' end /clone=IMAGE:582778 /clone_end=3' /gb=AI325941 /len=510 Length = 510 Score = 36.2 bits (18), Expect = 0.066 Identities = 18/18 (100%), Positives = 18/18 (100%) Query: 270 acatcatcccagaaatga 287 |||||||||||||||||| Sbjct: 292 acatcatcccagaaatga 275 >gnl|UG|Mm.22396 vz27h11.r1 Mus musculus cDNA, 5' end /clone=IMAGE:1327749 /clone_end=5' /gb=AA921218 /gi=3067997 /len=568 Length = 568 Score = 34.2 bits (17), Expect = 0.26 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 101 tattagctctcaagttc 117 ||||||||||||||||| Sbjct: 513 tattagctctcaagttc 529 >gnl|UG|Mm.1567 Murine phosphoprotein phosphatase mRNA, complete cds /cds=(216,1757) /gb=M81475 /gi=200465 /len=1943 Length = 1943 Score = 34.2 bits (17), Expect = 0.26 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 297 aaaatggtcatttttct 313 ||||||||||||||||| Sbjct: 1915 aaaatggtcatttttct 1899 >gnl|UG|Mm.28580 Mus musculus myotubularin (Mtm1) mRNA, complete cds /cds=(75,1886) /gb=AF073996 /gi=3882999 /len=3339 Length = 3339 Score = 34.2 bits (17), Expect = 0.26 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 292 aaaacaaaatggtcatt 308 ||||||||||||||||| Sbjct: 776 aaaacaaaatggtcatt 792 >gnl|UG|Mm.2950 Postmeiotic segregation increased 2 (S. cerevisiae) /cds=(185,2764) /gb=U28724 /gi=896062 /len=3056 Length = 3056 Score = 32.2 bits (16), Expect = 1.0 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 324 cagtgactggagcatc 339 |||||||||||||||| Sbjct: 2463 cagtgactggagcatc 2448 Database: /ddhome/DDsys/GenDB/UniGeneMm/Mm.seq.uniq Posted date: Feb 17, 1999 1:37 AM Number of letters in database: 15,836,343 Number of sequences in database: 15,275 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2922 Number of Sequences: 15275 Number of extensions: 2922 Number of successful extensions: 759 Number of sequences better than 10: 18 length of query: 346 length of database: 15836343 effective HSP length: 16 effective length of query: 330 effective length of database: 15591943 effective search space: 5145341190 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 15 (30.2 bits)