BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 01034 (519 letters) Database: /ddhome/DDsys/GenDB/UniGeneMm/Mm.seq.uniq 15,275 sequences; 15,836,343 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Mm.20260 mx76e06.r1 Mus musculus cDNA, 5' end /clone=IMA... 34 0.40 gnl|UG|Mm.4644 Mus musculus sperm fertilization protein sp56 pr... 34 0.40 gnl|UG|Mm.3951 Mouse gene for Thy-1 antigen /cds=(0,488) /gb=X0... 32 1.6 gnl|UG|Mm.6925 Secretory protein SEC8 (S. cerevisiae) /cds=(29,... 32 1.6 >gnl|UG|Mm.20260 mx76e06.r1 Mus musculus cDNA, 5' end /clone=IMAGE:692290 /clone_end=5' /gb=AA238355 /gi=1862377 /len=518 Length = 518 Score = 34.2 bits (17), Expect = 0.40 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 393 acagccaaggtgtggcc 409 ||||||||||||||||| Sbjct: 325 acagccaaggtgtggcc 309 >gnl|UG|Mm.4644 Mus musculus sperm fertilization protein sp56 precursor (SP56) mRNA, complete cds /cds=(79,1818) /gb=U17108 /gi=897562 /len=2026 Length = 2026 Score = 34.2 bits (17), Expect = 0.40 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 263 tgggaagcacagtggga 279 ||||||||||||||||| Sbjct: 577 tgggaagcacagtggga 593 >gnl|UG|Mm.3951 Mouse gene for Thy-1 antigen /cds=(0,488) /gb=X03151 /gi=54788 /len=1606 Length = 1606 Score = 32.2 bits (16), Expect = 1.6 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 413 gtatgactgtaccagg 428 |||||||||||||||| Sbjct: 936 gtatgactgtaccagg 921 >gnl|UG|Mm.6925 Secretory protein SEC8 (S. cerevisiae) /cds=(29,2944) /gb=AF022962 /gi=2547135 /len=3137 Length = 3137 Score = 32.2 bits (16), Expect = 1.6 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 384 gaattgaccacagcca 399 |||||||||||||||| Sbjct: 231 gaattgaccacagcca 246 Database: /ddhome/DDsys/GenDB/UniGeneMm/Mm.seq.uniq Posted date: Feb 17, 1999 1:37 AM Number of letters in database: 15,836,343 Number of sequences in database: 15,275 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3975 Number of Sequences: 15275 Number of extensions: 3975 Number of successful extensions: 290 Number of sequences better than 10: 6 length of query: 519 length of database: 15836343 effective HSP length: 17 effective length of query: 502 effective length of database: 15576668 effective search space: 7819487336 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 15 (30.2 bits)