BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 912f06 (298 letters) Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq 62,236 sequences; 45,520,635 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Hs.127261 zw66d01.r1 Homo sapiens cDNA, 5' end /clone=IM... 36 0.16 gnl|UG|Hs.75897 Homo sapiens mRNA-associated protein mrnp41 mRN... 34 0.64 gnl|UG|Hs.69740 Zinc finger protein 136 (clone pHZ-20) /cds=(71... 32 2.5 gnl|UG|Hs.134368 zx79c09.r1 Homo sapiens cDNA, 5' end /clone=IM... 32 2.5 gnl|UG|Hs.6193 zf11f10.r1 Homo sapiens cDNA, 5' end /clone=IMAG... 32 2.5 >gnl|UG|Hs.127261 zw66d01.r1 Homo sapiens cDNA, 5' end /clone=IMAGE:781153 /clone_end=5' /gb=AA446054 /gi=2158719 /len=416 Length = 416 Score = 36.2 bits (18), Expect = 0.16 Identities = 18/18 (100%), Positives = 18/18 (100%) Query: 166 ataaaagacactcctttt 183 |||||||||||||||||| Sbjct: 358 ataaaagacactcctttt 375 >gnl|UG|Hs.75897 Homo sapiens mRNA-associated protein mrnp41 mRNA, complete cds /cds=(280,1386) /gb=U85943 /gi=2231591 /len=1705 Length = 1705 Score = 34.2 bits (17), Expect = 0.64 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 66 gtggctggagactctgg 82 ||||||||||||||||| Sbjct: 1387 gtggctggagactctgg 1403 >gnl|UG|Hs.69740 Zinc finger protein 136 (clone pHZ-20) /cds=(71,1693) /gb=U09367 /gi=487784 /len=2489 Length = 2489 Score = 32.2 bits (16), Expect = 2.5 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 21 ttgtgtgttctttcat 36 |||||||||||||||| Sbjct: 2098 ttgtgtgttctttcat 2083 >gnl|UG|Hs.134368 zx79c09.r1 Homo sapiens cDNA, 5' end /clone=IMAGE:809968 /clone_end=5' /gb=AA454905 /gi=2177681 /len=456 Length = 456 Score = 32.2 bits (16), Expect = 2.5 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 79 ctgggctgccacagaa 94 |||||||||||||||| Sbjct: 221 ctgggctgccacagaa 236 >gnl|UG|Hs.6193 zf11f10.r1 Homo sapiens cDNA, 5' end /clone=IMAGE:376651 /clone_end=5' /gb=AA045149 /gi=1523489 /len=632 Length = 632 Score = 32.2 bits (16), Expect = 2.5 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 196 agcaacaggaaggaaa 211 |||||||||||||||| Sbjct: 520 agcaacaggaaggaaa 535 Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq Posted date: Feb 27, 1999 1:26 AM Number of letters in database: 45,520,635 Number of sequences in database: 62,236 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6505 Number of Sequences: 62236 Number of extensions: 6505 Number of successful extensions: 1728 Number of sequences better than 10: 9 length of query: 298 length of database: 45520635 effective HSP length: 17 effective length of query: 281 effective length of database: 44462623 effective search space: 12493997063 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 15 (30.2 bits)