BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 775e07 (366 letters) Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq 62,236 sequences; 45,520,635 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Hs.144424 zm31c06.s1 Homo sapiens cDNA, 3' end /clone=52... 34 0.79 gnl|UG|Hs.77667 Human Ly-6-related protein (9804) gene, complet... 34 0.79 gnl|UG|Hs.108945 Homo sapiens mRNA for KIAA0515 protein, partia... 32 3.1 gnl|UG|Hs.7844 H.sapiens giantin mRNA /cds=(126,9905) /gb=X7530... 32 3.1 >gnl|UG|Hs.144424 zm31c06.s1 Homo sapiens cDNA, 3' end /clone=527242 /clone_end=3' /gb=AA703800 /len=524 Length = 524 Score = 34.2 bits (17), Expect = 0.79 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 274 ccaaaagcaagccattt 290 ||||||||||||||||| Sbjct: 115 ccaaaagcaagccattt 131 >gnl|UG|Hs.77667 Human Ly-6-related protein (9804) gene, complete cds /cds=(135,530) /gb=U66711 /gi=1519439 /len=1145 Length = 1145 Score = 34.2 bits (17), Expect = 0.79 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 197 tggggtggatgatgtga 213 ||||||||||||||||| Sbjct: 726 tggggtggatgatgtga 742 >gnl|UG|Hs.108945 Homo sapiens mRNA for KIAA0515 protein, partial cds /cds=(0,2013) /gb=AB011087 /gi=3043553 /len=6335 Length = 6335 Score = 32.2 bits (16), Expect = 3.1 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 130 ttttatttggggtggg 145 |||||||||||||||| Sbjct: 4360 ttttatttggggtggg 4345 >gnl|UG|Hs.7844 H.sapiens giantin mRNA /cds=(126,9905) /gb=X75304 /gi=405714 /len=10300 Length = 10300 Score = 32.2 bits (16), Expect = 3.1 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 145 gttgttgcaagggcag 160 |||||||||||||||| Sbjct: 1462 gttgttgcaagggcag 1447 Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq Posted date: Feb 27, 1999 1:26 AM Number of letters in database: 45,520,635 Number of sequences in database: 62,236 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9723 Number of Sequences: 62236 Number of extensions: 9723 Number of successful extensions: 2802 Number of sequences better than 10: 9 length of query: 366 length of database: 45520635 effective HSP length: 17 effective length of query: 349 effective length of database: 44462623 effective search space: 15517455427 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 16 (32.2 bits)