BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 772b02 (275 letters) Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq 62,236 sequences; 45,520,635 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Hs.123405 ai67c02.s1 Homo sapiens cDNA, 3' end /clone=13... 32 2.3 gnl|UG|Hs.115770 Homo sapiens osteoprotegerin ligand mRNA, comp... 32 2.3 gnl|UG|Hs.117891 od15b02.s1 Homo sapiens cDNA /clone=IMAGE:1367... 32 2.3 gnl|UG|Hs.124327 oc46a09.s1 Homo sapiens cDNA /clone=IMAGE:1352... 32 2.3 gnl|UG|Hs.144914 oy99c11.x1 Homo sapiens cDNA, 3' end /clone=IM... 32 2.3 >gnl|UG|Hs.123405 ai67c02.s1 Homo sapiens cDNA, 3' end /clone=1375874 /clone_end=3' /gb=AA813492 /gi=2882177 /len=418 Length = 418 Score = 32.2 bits (16), Expect = 2.3 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 225 tagtctctgctcccaa 240 |||||||||||||||| Sbjct: 229 tagtctctgctcccaa 244 >gnl|UG|Hs.115770 Homo sapiens osteoprotegerin ligand mRNA, complete cds /cds=(184,1137) /gb=AF053712 /gi=3057145 /len=2271 Length = 2271 Score = 32.2 bits (16), Expect = 2.3 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 6 agttttccccagggaa 21 |||||||||||||||| Sbjct: 1782 agttttccccagggaa 1767 >gnl|UG|Hs.117891 od15b02.s1 Homo sapiens cDNA /clone=IMAGE:1367979 /gb=AA836098 /gi=2910417 /len=501 Length = 501 Score = 32.2 bits (16), Expect = 2.3 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 168 aacctgagttctgatg 183 |||||||||||||||| Sbjct: 345 aacctgagttctgatg 330 >gnl|UG|Hs.124327 oc46a09.s1 Homo sapiens cDNA /clone=IMAGE:1352728 /gb=AA828421 /len=388 Length = 388 Score = 32.2 bits (16), Expect = 2.3 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 215 agattcaggatagtct 230 |||||||||||||||| Sbjct: 189 agattcaggatagtct 174 >gnl|UG|Hs.144914 oy99c11.x1 Homo sapiens cDNA, 3' end /clone=IMAGE:1673972 /clone_end=3' /gb=AI074613 /gi=3401257 /len=706 Length = 706 Score = 32.2 bits (16), Expect = 2.3 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 12 ccccagggaagaacat 27 |||||||||||||||| Sbjct: 495 ccccagggaagaacat 480 Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq Posted date: Feb 27, 1999 1:26 AM Number of letters in database: 45,520,635 Number of sequences in database: 62,236 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4512 Number of Sequences: 62236 Number of extensions: 4512 Number of successful extensions: 1259 Number of sequences better than 10: 7 length of query: 275 length of database: 45520635 effective HSP length: 17 effective length of query: 258 effective length of database: 44462623 effective search space: 11471356734 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 15 (30.2 bits)