BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 143e05 (352 letters) Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq 62,236 sequences; 45,520,635 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Hs.2631 Desmoglein 2 /cds=(11,3364) /gb=Z26317 /gi=41617... 34 0.76 gnl|UG|Hs.153402 qg51h07.x1 Homo sapiens cDNA, 3' end /clone=IM... 32 3.0 gnl|UG|Hs.42484 af71c10.r1 Homo sapiens cDNA, 5' end /clone=IMA... 32 3.0 gnl|UG|Hs.10315 Human mRNA for KIAA0245 gene, complete cds /cds... 32 3.0 gnl|UG|Hs.148461 qi45g06.x1 Homo sapiens cDNA, 3' end /clone=IM... 32 3.0 >gnl|UG|Hs.2631 Desmoglein 2 /cds=(11,3364) /gb=Z26317 /gi=416177 /len=3516 Length = 3516 Score = 34.2 bits (17), Expect = 0.76 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 214 tctcctgtatctttatt 230 ||||||||||||||||| Sbjct: 664 tctcctgtatctttatt 648 >gnl|UG|Hs.153402 qg51h07.x1 Homo sapiens cDNA, 3' end /clone=IMAGE:1838749 /clone_end=3' /gb=AI208105 /gi=3770047 /len=366 Length = 366 Score = 32.2 bits (16), Expect = 3.0 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 260 agaaaataactgggaa 275 |||||||||||||||| Sbjct: 229 agaaaataactgggaa 244 >gnl|UG|Hs.42484 af71c10.r1 Homo sapiens cDNA, 5' end /clone=IMAGE:1047474 /clone_end=5' /gb=AA625313 /gi=2537698 /len=553 Length = 553 Score = 32.2 bits (16), Expect = 3.0 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 3 ttcaaagttcaaatct 18 |||||||||||||||| Sbjct: 360 ttcaaagttcaaatct 375 >gnl|UG|Hs.10315 Human mRNA for KIAA0245 gene, complete cds /cds=(261,1808) /gb=D87432 /gi=1665758 /len=6296 Length = 6296 Score = 32.2 bits (16), Expect = 3.0 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 306 ctggctcccgacttgg 321 |||||||||||||||| Sbjct: 593 ctggctcccgacttgg 578 >gnl|UG|Hs.148461 qi45g06.x1 Homo sapiens cDNA, 3' end /clone=IMAGE:1859482 /clone_end=3' /gb=AI198983 /gi=3751589 /len=261 Length = 261 Score = 32.2 bits (16), Expect = 3.0 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 279 cagtgggaaaccctgt 294 |||||||||||||||| Sbjct: 52 cagtgggaaaccctgt 67 Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq Posted date: Feb 27, 1999 1:26 AM Number of letters in database: 45,520,635 Number of sequences in database: 62,236 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5516 Number of Sequences: 62236 Number of extensions: 5516 Number of successful extensions: 1217 Number of sequences better than 10: 5 length of query: 352 length of database: 45520635 effective HSP length: 17 effective length of query: 335 effective length of database: 44462623 effective search space: 14894978705 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 16 (32.2 bits)