BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 050g08 (448 letters) Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq 62,236 sequences; 45,520,635 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Hs.44782 Homo sapiens DNA sequence from PAC 68O2 on chro... 38 0.062 gnl|UG|Hs.132942 Homo sapiens mRNA for KIAA0621 protein, partia... 38 0.062 gnl|UG|Hs.137118 AF052493 Homo sapiens cDNA /clone=RA107 /gb=AF... 38 0.062 gnl|UG|Hs.1361 Cytochrome P450, subfamily I (aromatic compound-... 38 0.062 gnl|UG|Hs.20380 zq83d04.s1 Homo sapiens cDNA, 3' end /clone=IMA... 32 3.9 >gnl|UG|Hs.44782 Homo sapiens DNA sequence from PAC 68O2 on chromosome 22. Contains apolipoprotein L, myosin heavy chain, ESTs, CA repeat, STS and GSS /cds=(0,5882) /gb=Z82215 /gi=3135984 /len=5883 Length = 5883 Score = 38.2 bits (19), Expect = 0.062 Identities = 19/19 (100%), Positives = 19/19 (100%) Query: 264 tccaggtgggccagcacac 282 ||||||||||||||||||| Sbjct: 2315 tccaggtgggccagcacac 2297 >gnl|UG|Hs.132942 Homo sapiens mRNA for KIAA0621 protein, partial cds /cds=(0,2261) /gb=AB014521 /gi=3327055 /len=6300 Length = 6300 Score = 38.2 bits (19), Expect = 0.062 Identities = 22/23 (95%), Positives = 22/23 (95%) Query: 249 ccaaagtcctgggattccaggtg 271 ||||||| ||||||||||||||| Sbjct: 5262 ccaaagtgctgggattccaggtg 5284 >gnl|UG|Hs.137118 AF052493 Homo sapiens cDNA /clone=RA107 /gb=AF052493 /gi=3090890 /len=514 Length = 514 Score = 38.2 bits (19), Expect = 0.062 Identities = 22/23 (95%), Positives = 22/23 (95%) Query: 249 ccaaagtcctgggattccaggtg 271 |||||||||||||||| |||||| Sbjct: 38 ccaaagtcctgggattacaggtg 60 >gnl|UG|Hs.1361 Cytochrome P450, subfamily I (aromatic compound-inducible), polypeptide 2 /cds=(8,1555) /gb=M55053 /gi=181307 /len=3149 Length = 3149 Score = 38.2 bits (19), Expect = 0.062 Identities = 22/23 (95%), Positives = 22/23 (95%) Query: 249 ccaaagtcctgggattccaggtg 271 |||||||||||||||| |||||| Sbjct: 2172 ccaaagtcctgggattacaggtg 2194 >gnl|UG|Hs.20380 zq83d04.s1 Homo sapiens cDNA, 3' end /clone=IMAGE:648199 /clone_end=3' /gb=AA206798 /gi=1802167 /len=594 Length = 594 Score = 32.2 bits (16), Expect = 3.9 Identities = 21/23 (91%), Positives = 21/23 (91%) Query: 249 ccaaagtcctgggattccaggtg 271 ||||||| | ||||||||||||| Sbjct: 510 ccaaagtgcngggattccaggtg 488 Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq Posted date: Feb 27, 1999 1:26 AM Number of letters in database: 45,520,635 Number of sequences in database: 62,236 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12797 Number of Sequences: 62236 Number of extensions: 12797 Number of successful extensions: 3681 Number of sequences better than 10: 70 length of query: 448 length of database: 45520635 effective HSP length: 17 effective length of query: 431 effective length of database: 44462623 effective search space: 19163390513 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 16 (32.2 bits)