BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 01625 (790 letters) Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq 62,236 sequences; 45,520,635 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Hs.1742 Homo sapiens ras GTPase-activating-like protein ... 36 0.44 gnl|UG|Hs.13321 Human Zn-15 related zinc finger protein (rlf) m... 36 0.44 gnl|UG|Hs.18983 zp88e03.s1 Homo sapiens cDNA, 3' end /clone=IMA... 34 1.7 gnl|UG|Hs.46944 qm53h03.x1 Homo sapiens cDNA, 3' end /clone=IMA... 34 1.7 >gnl|UG|Hs.1742 Homo sapiens ras GTPase-activating-like protein (IQGAP1) mRNA, complete cds /cds=(467,5440) /gb=L33075 /gi=536843 /len=7573 Length = 7573 Score = 36.2 bits (18), Expect = 0.44 Identities = 18/18 (100%), Positives = 18/18 (100%) Query: 366 attcagacggtttttcca 383 |||||||||||||||||| Sbjct: 4250 attcagacggtttttcca 4267 >gnl|UG|Hs.13321 Human Zn-15 related zinc finger protein (rlf) mRNA, complete cds /cds=(12,5756) /gb=U22377 /gi=1218027 /len=6229 Length = 6229 Score = 36.2 bits (18), Expect = 0.44 Identities = 18/18 (100%), Positives = 18/18 (100%) Query: 178 accattccttcagtctct 195 |||||||||||||||||| Sbjct: 465 accattccttcagtctct 482 >gnl|UG|Hs.18983 zp88e03.s1 Homo sapiens cDNA, 3' end /clone=IMAGE:627292 /clone_end=3' /gb=AA191495 /gi=1780175 /len=522 Length = 522 Score = 34.2 bits (17), Expect = 1.7 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 410 ccttcccagacatgcac 426 ||||||||||||||||| Sbjct: 315 ccttcccagacatgcac 299 >gnl|UG|Hs.46944 qm53h03.x1 Homo sapiens cDNA, 3' end /clone=IMAGE:1892501 /clone_end=3' /gb=AI276973 /gi=3899241 /len=483 Length = 483 Score = 34.2 bits (17), Expect = 1.7 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 220 cctatgaatatttttgt 236 ||||||||||||||||| Sbjct: 378 cctatgaatatttttgt 362 Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq Posted date: Feb 27, 1999 1:26 AM Number of letters in database: 45,520,635 Number of sequences in database: 62,236 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 21489 Number of Sequences: 62236 Number of extensions: 21489 Number of successful extensions: 1525 Number of sequences better than 10: 11 length of query: 790 length of database: 45520635 effective HSP length: 18 effective length of query: 772 effective length of database: 44400387 effective search space: 34277098764 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 16 (32.2 bits)