GENOME RESOURCES for
RAT
Our international collaborative effort has
been providing the useful genomic resources of the rat. It is
also a fruit of the successful collaboration between industrial
and academic research groups. Otsuka GEN Research Institute,
Otsuka Pharmaceutical Co. Ltd (JPN), Department of Genetics,
University of Cambridge (UK), Wellcome Trust Centre for Human
Genetics, University of Oxford (UK), Research Genetics Inc (USA),
and Institute of Medical Science, University of Tokyo (JPN) have
been working together to accelerate the genomic researches of the
rat. We are proud to provide the first genomic resources to the
research community of rat genome (see Nature Genetics, May 1999 issue).
- RH Framework Map
- The graphical RH
framework map. Comprehensive information of each
markers are cross-referenced.
- RH Microsatellite Marker
Map (Got Map)
- The
graphical RH comprehensive map of Got (Gen
otsuka) microsatellite
markers. We have isolated more than 8,000
independent microsatellite sequences. Of them
over 3,000 novel Got markers are mapped.
More precise information is available through the
links. The data is integrated into the framework,
mainly consisting of Wox and Rat
markers.
- Information of
Otsuka Markers
- Comprehensive
information of 8,201 Otsuka Microsatellite
Markers can be directly searched by
"internal code", "Genbank
accession number", and "RHDB accession
number".
- Genome-Wide
Comparative Map (RAT-MOUSE-HUMAN)
- The
graphical tabular gene map with more than 500 rat
genes. The data is displayed with human and mouse
counterpart mapping data. In other words, precise
information of the genome-wide synteny can be
seen here.
-
RH Mapping Server
- RH mapping
server of T55 rat RH panel. The mapping position
is calculated based on our RH framework map
(2-point analysis). This site also supports the
mapping services of the widely-used huuman GB4 or
G3, and mouse T31 RH pane
- NIDDM Gene
Map (Under
Construction)
- The
graphical map of more than 100 NIDDM-related
genes presented on RH framework maps.