BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 721h05 (337 letters) Database: /ddhome/DDsys/GenDB/UniGeneMm/Mm.seq.uniq 15,275 sequences; 15,836,343 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Mm.3535 Mus musculus CD-1 orphan receptor TAK1 (TAK1) mR... 34 0.25 gnl|UG|Mm.361 Protein tyrosine phosphatase, non-receptor type 1... 34 0.25 gnl|UG|Mm.12912 Mus musculus SHYC (Shyc) mRNA, complete cds /cd... 32 1.0 gnl|UG|Mm.4858 Cathepsin G /cds=(28,813) /gb=M96801 /gi=192383 ... 32 1.0 gnl|UG|Mm.27289 AU041968 Mus musculus cDNA, 3' end /clone=J1011... 32 1.0 >gnl|UG|Mm.3535 Mus musculus CD-1 orphan receptor TAK1 (TAK1) mRNA, complete cds /cds=(66,1856) /gb=U11688 /gi=885592 /len=2183 Length = 2183 Score = 34.2 bits (17), Expect = 0.25 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 22 tgtcagccacttcttcc 38 ||||||||||||||||| Sbjct: 1961 tgtcagccacttcttcc 1977 >gnl|UG|Mm.361 Protein tyrosine phosphatase, non-receptor type 18 /cds=(66,1424) /gb=U52523 /gi=1399580 /len=1557 Length = 1557 Score = 34.2 bits (17), Expect = 0.25 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 313 gcagtgcagacagagga 329 ||||||||||||||||| Sbjct: 886 gcagtgcagacagagga 902 >gnl|UG|Mm.12912 Mus musculus SHYC (Shyc) mRNA, complete cds /cds=(33,3794) /gb=AF072697 /gi=3293550 /len=4112 Length = 4112 Score = 32.2 bits (16), Expect = 1.0 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 44 gataaatttcagtgaa 59 |||||||||||||||| Sbjct: 1848 gataaatttcagtgaa 1863 >gnl|UG|Mm.4858 Cathepsin G /cds=(28,813) /gb=M96801 /gi=192383 /len=871 Length = 871 Score = 32.2 bits (16), Expect = 1.0 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 76 gttctggaaagatgca 91 |||||||||||||||| Sbjct: 18 gttctggaaagatgca 33 >gnl|UG|Mm.27289 AU041968 Mus musculus cDNA, 3' end /clone=J1011H01 /clone_end=3' /gb=AU041968 /gi=3956203 /len=590 Length = 590 Score = 32.2 bits (16), Expect = 1.0 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 286 tttattggttagaaaa 301 |||||||||||||||| Sbjct: 32 tttattggttagaaaa 47 Database: /ddhome/DDsys/GenDB/UniGeneMm/Mm.seq.uniq Posted date: Feb 17, 1999 1:37 AM Number of letters in database: 15,836,343 Number of sequences in database: 15,275 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3057 Number of Sequences: 15275 Number of extensions: 3057 Number of successful extensions: 879 Number of sequences better than 10: 19 length of query: 337 length of database: 15836343 effective HSP length: 16 effective length of query: 321 effective length of database: 15591943 effective search space: 5005013703 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 15 (30.2 bits)