BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 712e12 (293 letters) Database: /ddhome/DDsys/GenDB/UniGeneMm/Mm.seq.uniq 15,275 sequences; 15,836,343 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Mm.28729 AU017531 Mus musculus cDNA, 3' end /clone=J0740... 125 8e-29 gnl|UG|Mm.19585 AU015376 Mus musculus cDNA, 3' end /clone=J0711... 125 8e-29 gnl|UG|Mm.26265 AU021468 Mus musculus cDNA, 3' end /clone=J0547... 125 8e-29 gnl|UG|Mm.25058 C80007 Mus musculus cDNA, 3' end /clone=J0075B0... 123 3e-28 gnl|UG|Mm.25928 AU015689 Mus musculus cDNA, 3' end /clone=J0715... 119 5e-27 >gnl|UG|Mm.28729 AU017531 Mus musculus cDNA, 3' end /clone=J0740D10 /clone_end=3' /gb=AU017531 /gi=3373021 /len=576 Length = 576 Score = 125 bits (63), Expect = 8e-29 Identities = 81/87 (93%), Positives = 81/87 (93%) Query: 207 agctggagttatcacagagaaaggagcctctgttgtggaaatgcctccatgagaaccagc 266 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| | Sbjct: 309 agctggagttatcacagagaaaggagcttctgttgaggaaatgcctccatgagatccaac 250 Query: 267 tgtaaggcattttctcaactaatgatc 293 |||||||||||||||||| || ||||| Sbjct: 249 tgtaaggcattttctcaattagtgatc 223 >gnl|UG|Mm.19585 AU015376 Mus musculus cDNA, 3' end /clone=J0711B10 /clone_end=3' /gb=AU015376 /gi=3370167 /len=581 Length = 581 Score = 125 bits (63), Expect = 8e-29 Identities = 81/87 (93%), Positives = 81/87 (93%) Query: 207 agctggagttatcacagagaaaggagcctctgttgtggaaatgcctccatgagaaccagc 266 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| | Sbjct: 309 agctggagttatcacagagaaaggagcttctgttgaggaaatgcctccatgagatccaac 250 Query: 267 tgtaaggcattttctcaactaatgatc 293 |||||||||||||||||| || ||||| Sbjct: 249 tgtaaggcattttctcaattagtgatc 223 >gnl|UG|Mm.26265 AU021468 Mus musculus cDNA, 3' end /clone=J0547H03 /clone_end=3' /gb=AU021468 /gi=3377052 /len=559 Length = 559 Score = 125 bits (63), Expect = 8e-29 Identities = 81/87 (93%), Positives = 81/87 (93%) Query: 207 agctggagttatcacagagaaaggagcctctgttgtggaaatgcctccatgagaaccagc 266 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| | Sbjct: 308 agctggagttatcacagagaaaggagcttctgttgaggaaatgcctccatgagatccaac 249 Query: 267 tgtaaggcattttctcaactaatgatc 293 |||||||||||||||||| || ||||| Sbjct: 248 tgtaaggcattttctcaattagtgatc 222 >gnl|UG|Mm.25058 C80007 Mus musculus cDNA, 3' end /clone=J0075B08 /clone_end=3' /gb=C80007 /gi=2520337 /len=570 Length = 570 Score = 123 bits (62), Expect = 3e-28 Identities = 92/102 (90%), Positives = 92/102 (90%) Query: 192 tgtcaacatgacgcaagctggagttatcacagagaaaggagcctctgttgtggaaatgcc 251 ||||||| |||| |||||||||||||||||| ||||||||||||| ||| ||||||||| Sbjct: 216 tgtcaacttgacacaagctggagttatcacacagaaaggagcctcccttgaggaaatgcc 275 Query: 252 tccatgagaaccagctgtaaggcattttctcaactaatgatc 293 ||||||||| ||||||| ||||||||||||||| || ||||| Sbjct: 276 tccatgagatccagctgcaaggcattttctcaattagtgatc 317 >gnl|UG|Mm.25928 AU015689 Mus musculus cDNA, 3' end /clone=J0715B07 /clone_end=3' /gb=AU015689 /gi=3370480 /len=588 Length = 588 Score = 119 bits (60), Expect = 5e-27 Identities = 80/87 (91%), Positives = 80/87 (91%) Query: 207 agctggagttatcacagagaaaggagcctctgttgtggaaatgcctccatgagaaccagc 266 ||||||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||| | Sbjct: 309 agctggagttatcacagagaaaggagcttctgttgaggaaatncctccatgagatccaac 250 Query: 267 tgtaaggcattttctcaactaatgatc 293 |||||||||||||||||| || ||||| Sbjct: 249 tgtaaggcattttctcaattagtgatc 223 Database: /ddhome/DDsys/GenDB/UniGeneMm/Mm.seq.uniq Posted date: Feb 17, 1999 1:37 AM Number of letters in database: 15,836,343 Number of sequences in database: 15,275 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2333 Number of Sequences: 15275 Number of extensions: 2333 Number of successful extensions: 660 Number of sequences better than 10: 51 length of query: 293 length of database: 15836343 effective HSP length: 16 effective length of query: 277 effective length of database: 15591943 effective search space: 4318968211 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 15 (30.2 bits)