BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 01458 (404 letters) Database: /ddhome/DDsys/GenDB/UniGeneMm/Mm.seq.uniq 15,275 sequences; 15,836,343 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Mm.26333 AU022752 Mus musculus cDNA, 3' end /clone=J0420... 36 0.078 gnl|UG|Mm.22482 vk49e10.r1 Mus musculus cDNA, 5' end /clone=IMA... 36 0.078 >gnl|UG|Mm.26333 AU022752 Mus musculus cDNA, 3' end /clone=J0420B05 /clone_end=3' /gb=AU022752 /gi=3393099 /len=586 Length = 586 Score = 36.2 bits (18), Expect = 0.078 Identities = 21/22 (95%), Positives = 21/22 (95%) Query: 81 ggtgtatgagtctcgaccccag 102 ||||||||||| |||||||||| Sbjct: 125 ggtgtatgagtttcgaccccag 104 >gnl|UG|Mm.22482 vk49e10.r1 Mus musculus cDNA, 5' end /clone=IMAGE:958026 /clone_end=5' /gb=AA556012 /gi=2327185 /len=486 Length = 486 Score = 36.2 bits (18), Expect = 0.078 Identities = 21/22 (95%), Positives = 21/22 (95%) Query: 81 ggtgtatgagtctcgaccccag 102 ||||||||||| |||||||||| Sbjct: 109 ggtgtatgagtttcgaccccag 88 Database: /ddhome/DDsys/GenDB/UniGeneMm/Mm.seq.uniq Posted date: Feb 17, 1999 1:37 AM Number of letters in database: 15,836,343 Number of sequences in database: 15,275 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1743 Number of Sequences: 15275 Number of extensions: 1743 Number of successful extensions: 429 Number of sequences better than 10: 7 length of query: 404 length of database: 15836343 effective HSP length: 16 effective length of query: 388 effective length of database: 15591943 effective search space: 6049673884 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 15 (30.2 bits)