BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 911e04 (371 letters) Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq 62,236 sequences; 45,520,635 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Hs.158703 tc26e03.x1 Homo sapiens cDNA, 3' end /clone=IM... 40 0.013 gnl|UG|Hs.155983 Homo sapiens mRNA for KIAA0677 protein, comple... 38 0.051 gnl|UG|Hs.48926 za14d03.s1 Homo sapiens cDNA, 3' end /clone=IMA... 38 0.051 gnl|UG|Hs.141708 zc28b03.s1 Homo sapiens cDNA, 3' end /clone=IM... 36 0.20 >gnl|UG|Hs.158703 tc26e03.x1 Homo sapiens cDNA, 3' end /clone=IMAGE:2065756 /clone_end=3' /gb=AI374667 /len=432 Length = 432 Score = 40.1 bits (20), Expect = 0.013 Identities = 28/31 (90%), Positives = 28/31 (90%) Query: 320 tggctantataaataaggctactatgaacat 350 |||||| ||| ||||| |||||||||||||| Sbjct: 76 tggctattatgaataaagctactatgaacat 46 >gnl|UG|Hs.155983 Homo sapiens mRNA for KIAA0677 protein, complete cds /cds=(125,3319) /gb=AB014577 /gi=3327167 /len=4417 Length = 4417 Score = 38.2 bits (19), Expect = 0.051 Identities = 19/19 (100%), Positives = 19/19 (100%) Query: 116 gtgtgcgtgcgtgcgtgcg 134 ||||||||||||||||||| Sbjct: 3731 gtgtgcgtgcgtgcgtgcg 3749 Score = 34.2 bits (17), Expect = 0.80 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 118 gtgcgtgcgtgcgtgcg 134 ||||||||||||||||| Sbjct: 3737 gtgcgtgcgtgcgtgcg 3753 >gnl|UG|Hs.48926 za14d03.s1 Homo sapiens cDNA, 3' end /clone=IMAGE:292517 /clone_end=3' /gb=N68466 /gi=1224627 /len=472 Length = 472 Score = 38.2 bits (19), Expect = 0.051 Identities = 22/23 (95%), Positives = 22/23 (95%) Query: 330 aaataaggctactatgaacatag 352 |||||| |||||||||||||||| Sbjct: 426 aaataatgctactatgaacatag 404 >gnl|UG|Hs.141708 zc28b03.s1 Homo sapiens cDNA, 3' end /clone=IMAGE:323597 /clone_end=3' /gb=W44337 /gi=1329896 /len=472 Length = 472 Score = 36.2 bits (18), Expect = 0.20 Identities = 18/18 (100%), Positives = 18/18 (100%) Query: 235 gctgagtagtactccatt 252 |||||||||||||||||| Sbjct: 123 gctgagtagtactccatt 106 Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq Posted date: Feb 27, 1999 1:26 AM Number of letters in database: 45,520,635 Number of sequences in database: 62,236 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5646 Number of Sequences: 62236 Number of extensions: 5646 Number of successful extensions: 1516 Number of sequences better than 10: 17 length of query: 371 length of database: 45520635 effective HSP length: 17 effective length of query: 354 effective length of database: 44462623 effective search space: 15739768542 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 16 (32.2 bits)