BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 907b03 (275 letters) Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq 62,236 sequences; 45,520,635 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Hs.154612 qd80e02.x1 Homo sapiens cDNA, 3' end /clone=IM... 34 0.58 gnl|UG|Hs.162977 AJ003451 Homo sapiens cDNA /clone=MPIpl11-15F2... 34 0.58 gnl|UG|Hs.89543 Human DNA sequence from clone 88D7 on chromosom... 32 2.3 >gnl|UG|Hs.154612 qd80e02.x1 Homo sapiens cDNA, 3' end /clone=IMAGE:1735802 /clone_end=3' /gb=AI138521 /gi=3644493 /len=517 Length = 517 Score = 34.2 bits (17), Expect = 0.58 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 96 tttacatctatcccaca 112 ||||||||||||||||| Sbjct: 270 tttacatctatcccaca 286 >gnl|UG|Hs.162977 AJ003451 Homo sapiens cDNA /clone=MPIpl11-15F24 /gb=AJ003451 /gi=2769483 /len=683 Length = 683 Score = 34.2 bits (17), Expect = 0.58 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 46 ttttcaggtgtgaaaaa 62 ||||||||||||||||| Sbjct: 316 ttttcaggtgtgaaaaa 332 >gnl|UG|Hs.89543 Human DNA sequence from clone 88D7 on chromosome Xq25-26.3 Contains F9 (coagulation factor IX (plasma thromboplastic component, Christmas disease, haemophilia B)), dbl oncogene. EST, STS, GSS /cds=(175,2952) /gb=AL033403 /gi=3859054 /len=3653 Length = 3653 Score = 32.2 bits (16), Expect = 2.3 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 56 tgaaaaagccattgtt 71 |||||||||||||||| Sbjct: 2362 tgaaaaagccattgtt 2377 Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq Posted date: Feb 27, 1999 1:26 AM Number of letters in database: 45,520,635 Number of sequences in database: 62,236 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5787 Number of Sequences: 62236 Number of extensions: 5787 Number of successful extensions: 1567 Number of sequences better than 10: 3 length of query: 275 length of database: 45520635 effective HSP length: 17 effective length of query: 258 effective length of database: 44462623 effective search space: 11471356734 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 15 (30.2 bits)