BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 878c08 (371 letters) Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq 62,236 sequences; 45,520,635 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Hs.7834 yy57d10.s1 Homo sapiens cDNA, 3' end /clone=IMAG... 34 0.80 gnl|UG|Hs.91384 oz21g04.x1 Homo sapiens cDNA, 3' end /clone=IMA... 34 0.80 gnl|UG|Hs.7218 oo65f04.s1 Homo sapiens cDNA, 3' end /clone=IMAG... 34 0.80 gnl|UG|Hs.151334 tg02d12.x1 Homo sapiens cDNA, 3' end /clone=IM... 34 0.80 >gnl|UG|Hs.7834 yy57d10.s1 Homo sapiens cDNA, 3' end /clone=IMAGE:277651 /clone_end=3' /gb=N45994 /gi=1187160 /len=581 Length = 581 Score = 34.2 bits (17), Expect = 0.80 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 224 ctcaccctcgtctgggc 240 ||||||||||||||||| Sbjct: 375 ctcaccctcgtctgggc 359 >gnl|UG|Hs.91384 oz21g04.x1 Homo sapiens cDNA, 3' end /clone=IMAGE:1676022 /clone_end=3' /gb=AI052350 /gi=3308341 /len=306 Length = 306 Score = 34.2 bits (17), Expect = 0.80 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 20 ctagcttatttacattt 36 ||||||||||||||||| Sbjct: 171 ctagcttatttacattt 155 >gnl|UG|Hs.7218 oo65f04.s1 Homo sapiens cDNA, 3' end /clone=IMAGE:1571071 /clone_end=3' /gb=AA936961 /gi=3094582 /len=544 Length = 544 Score = 34.2 bits (17), Expect = 0.80 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 235 ctgggcttcacaggttc 251 ||||||||||||||||| Sbjct: 223 ctgggcttcacaggttc 239 >gnl|UG|Hs.151334 tg02d12.x1 Homo sapiens cDNA, 3' end /clone=IMAGE:2107607 /clone_end=3' /gb=AI380642 /len=502 Length = 502 Score = 34.2 bits (17), Expect = 0.80 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 202 gtaactctagttccagg 218 ||||||||||||||||| Sbjct: 240 gtaactctagttccagg 256 Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq Posted date: Feb 27, 1999 1:26 AM Number of letters in database: 45,520,635 Number of sequences in database: 62,236 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7916 Number of Sequences: 62236 Number of extensions: 7916 Number of successful extensions: 2101 Number of sequences better than 10: 13 length of query: 371 length of database: 45520635 effective HSP length: 17 effective length of query: 354 effective length of database: 44462623 effective search space: 15739768542 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 16 (32.2 bits)