BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 845g09 (360 letters) Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq 62,236 sequences; 45,520,635 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Hs.58247 H.sapiens mRNA for trypsinogen IV b-form /cds=(... 52 3e-06 gnl|UG|Hs.111769 Protease, serine, 1 (trypsin 1) /cds=(6,749) /... 48 5e-05 gnl|UG|Hs.57771 Homo sapiens mRNA for serine protease (TLSP), c... 38 0.050 gnl|UG|Hs.69423 Homo sapiens normal epithelial cell-specific 1 ... 34 0.78 gnl|UG|Hs.88061 aa79g11.s1 Homo sapiens cDNA, 3' end /clone=IMA... 34 0.78 >gnl|UG|Hs.58247 H.sapiens mRNA for trypsinogen IV b-form /cds=(4,783) /gb=X71345 /gi=405755 /len=834 Length = 834 Score = 52.0 bits (26), Expect = 3e-06 Identities = 47/54 (87%), Positives = 47/54 (87%) Query: 233 caccgaagctgagcgtgttgccccagccagaaatgaggcactgagtgcctgcag 286 |||| ||||| || |||||||||||||| || |||||||||| |||||| |||| Sbjct: 494 caccaaagctcagagtgttgccccagccggagatgaggcactcagtgccagcag 441 >gnl|UG|Hs.111769 Protease, serine, 1 (trypsin 1) /cds=(6,749) /gb=M22612 /gi=521215 /len=800 Length = 800 Score = 48.1 bits (24), Expect = 5e-05 Identities = 27/28 (96%), Positives = 27/28 (96%) Query: 247 gtgttgccccagccagaaatgaggcact 274 ||||||||||||||||| |||||||||| Sbjct: 446 gtgttgccccagccagagatgaggcact 419 >gnl|UG|Hs.57771 Homo sapiens mRNA for serine protease (TLSP), complete cds /cds=(25,873) /gb=AB012917 /gi=3649790 /len=1186 Length = 1186 Score = 38.2 bits (19), Expect = 0.050 Identities = 25/27 (92%), Positives = 25/27 (92%) Query: 246 cgtgttgccccagccagaaatgaggca 272 |||| |||||||||| ||||||||||| Sbjct: 571 cgtgctgccccagccggaaatgaggca 545 >gnl|UG|Hs.69423 Homo sapiens normal epithelial cell-specific 1 (NES1) gene, complete cds /cds=(82,912) /gb=AF055481 /gi=3065710 /len=1442 Length = 1442 Score = 34.2 bits (17), Expect = 0.78 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 297 gctgggcagagccacag 313 ||||||||||||||||| Sbjct: 845 gctgggcagagccacag 829 >gnl|UG|Hs.88061 aa79g11.s1 Homo sapiens cDNA, 3' end /clone=IMAGE:827204 /clone_end=3' /gb=AA521311 /gi=2261854 /len=602 Length = 602 Score = 34.2 bits (17), Expect = 0.78 Identities = 20/21 (95%), Positives = 20/21 (95%) Query: 325 gaattgagtttcacaggggaa 345 |||||||||||||||| |||| Sbjct: 588 gaattgagtttcacagtggaa 568 Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq Posted date: Feb 27, 1999 1:26 AM Number of letters in database: 45,520,635 Number of sequences in database: 62,236 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8397 Number of Sequences: 62236 Number of extensions: 8397 Number of successful extensions: 2334 Number of sequences better than 10: 22 length of query: 360 length of database: 45520635 effective HSP length: 17 effective length of query: 343 effective length of database: 44462623 effective search space: 15250679689 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 16 (32.2 bits)