BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 777g06 (196 letters) Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq 62,236 sequences; 45,520,635 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Hs.147166 qc95a09.x1 Homo sapiens cDNA, 3' end /clone=IM... 80 8e-15 gnl|UG|Hs.118272 zb20g10.s1 Homo sapiens cDNA, 3' end /clone=IM... 36 0.10 gnl|UG|Hs.139920 af97d01.s1 Homo sapiens cDNA, 3' end /clone=IM... 36 0.10 gnl|UG|Hs.137637 ny99a12.s1 Homo sapiens cDNA /clone=IMAGE:1286... 36 0.10 gnl|UG|Hs.152585 no12c06.s1 Homo sapiens cDNA, 3' end /clone=IM... 34 0.41 >gnl|UG|Hs.147166 qc95a09.x1 Homo sapiens cDNA, 3' end /clone=IMAGE:1721944 /clone_end=3' /gb=AI192067 /gi=3743276 /len=369 Length = 369 Score = 79.8 bits (40), Expect = 8e-15 Identities = 89/104 (85%), Positives = 89/104 (85%), Gaps = 1/104 (0%) Query: 4 gatcactagttgggataataccttatagctgggtctcatggaggtgtttccacaagggag 63 |||||||| ||| || ||| ||||| || ||| ||||||||||| ||||| ||| || Sbjct: 225 gatcactaattgagaaaatgccttacagttggatctcatggaggcatttcctcaactgaa 284 Query: 64 gctcctttctctgtgataactccagcttgtatcaagttgacaca 107 |||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 285 gctcctttctctgtgataactccagc-tgtgtcaagttgacaca 327 >gnl|UG|Hs.118272 zb20g10.s1 Homo sapiens cDNA, 3' end /clone=IMAGE:302658 /clone_end=3' /gb=N90288 /gi=1443615 /len=418 Length = 418 Score = 36.2 bits (18), Expect = 0.10 Identities = 18/18 (100%), Positives = 18/18 (100%) Query: 95 tcaagttgacacataaaa 112 |||||||||||||||||| Sbjct: 106 tcaagttgacacataaaa 123 >gnl|UG|Hs.139920 af97d01.s1 Homo sapiens cDNA, 3' end /clone=IMAGE:1055713 /clone_end=3' /gb=AA628125 /gi=2540512 /len=420 Length = 420 Score = 36.2 bits (18), Expect = 0.10 Identities = 18/18 (100%), Positives = 18/18 (100%) Query: 95 tcaagttgacacataaaa 112 |||||||||||||||||| Sbjct: 399 tcaagttgacacataaaa 416 >gnl|UG|Hs.137637 ny99a12.s1 Homo sapiens cDNA /clone=IMAGE:1286398 /gb=AA741011 /gi=2779603 /len=484 Length = 484 Score = 36.2 bits (18), Expect = 0.10 Identities = 18/18 (100%), Positives = 18/18 (100%) Query: 96 caagttgacacataaaac 113 |||||||||||||||||| Sbjct: 345 caagttgacacataaaac 328 >gnl|UG|Hs.152585 no12c06.s1 Homo sapiens cDNA, 3' end /clone=IMAGE:1100458 /clone_end=3' /gb=AA584574 /gi=2369183 /len=421 Length = 421 Score = 34.2 bits (17), Expect = 0.41 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 95 tcaagttgacacataaa 111 ||||||||||||||||| Sbjct: 164 tcaagttgacacataaa 180 Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq Posted date: Feb 27, 1999 1:26 AM Number of letters in database: 45,520,635 Number of sequences in database: 62,236 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3341 Number of Sequences: 62236 Number of extensions: 3341 Number of successful extensions: 870 Number of sequences better than 10: 15 length of query: 196 length of database: 45520635 effective HSP length: 17 effective length of query: 179 effective length of database: 44462623 effective search space: 7958809517 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 15 (30.2 bits)