BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 776e10 (274 letters) Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq 62,236 sequences; 45,520,635 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Hs.147378 qg44h03.x1 Homo sapiens cDNA, 3' end /clone=IM... 34 0.58 gnl|UG|Hs.38841 Regulatory factor (trans-acting) 3 /cds=(8,2131... 34 0.58 gnl|UG|Hs.150986 yg95c01.r1 Homo sapiens cDNA, 5' end /clone=IM... 32 2.3 gnl|UG|Hs.145225 qp64a11.x1 Homo sapiens cDNA, 3' end /clone=IM... 32 2.3 >gnl|UG|Hs.147378 qg44h03.x1 Homo sapiens cDNA, 3' end /clone=IMAGE:1838069 /clone_end=3' /gb=AI208810 /gi=3770752 /len=376 Length = 376 Score = 34.2 bits (17), Expect = 0.58 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 155 cccttcctcttctggct 171 ||||||||||||||||| Sbjct: 310 cccttcctcttctggct 294 >gnl|UG|Hs.38841 Regulatory factor (trans-acting) 3 /cds=(8,2131) /gb=X76092 /gi=452403 /len=2514 Length = 2514 Score = 34.2 bits (17), Expect = 0.58 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 165 tctggcttgacacgaat 181 ||||||||||||||||| Sbjct: 784 tctggcttgacacgaat 768 >gnl|UG|Hs.150986 yg95c01.r1 Homo sapiens cDNA, 5' end /clone=IMAGE:41305 /clone_end=5' /gb=R56723 /gi=826829 /len=541 Length = 541 Score = 32.2 bits (16), Expect = 2.3 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 46 tggtcttttgttactg 61 |||||||||||||||| Sbjct: 379 tggtcttttgttactg 394 >gnl|UG|Hs.145225 qp64a11.x1 Homo sapiens cDNA, 3' end /clone=IMAGE:1927772 /clone_end=3' /gb=AI266130 /gi=3884288 /len=407 Length = 407 Score = 32.2 bits (16), Expect = 2.3 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 128 tattttggtgaataaa 143 |||||||||||||||| Sbjct: 31 tattttggtgaataaa 16 Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq Posted date: Feb 27, 1999 1:26 AM Number of letters in database: 45,520,635 Number of sequences in database: 62,236 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4892 Number of Sequences: 62236 Number of extensions: 4892 Number of successful extensions: 1335 Number of sequences better than 10: 7 length of query: 274 length of database: 45520635 effective HSP length: 17 effective length of query: 257 effective length of database: 44462623 effective search space: 11426894111 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 15 (30.2 bits)