BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 769a12 (273 letters) Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq 62,236 sequences; 45,520,635 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Hs.7019 Homo sapiens mRNA for GTPase-activating protein,... 86 2e-16 gnl|UG|Hs.75437 Homo sapiens (clone zap128) mRNA, 3' end of cds... 62 3e-09 gnl|UG|Hs.96253 Homo sapiens alpha1A-voltage-dependent calcium ... 60 1e-08 gnl|UG|Hs.143782 an01f06.x1 Homo sapiens cDNA, 3' end /clone=IM... 54 6e-07 gnl|UG|Hs.75649 H.sapiens 63 kDa protein kinase related to rat ... 54 6e-07 >gnl|UG|Hs.7019 Homo sapiens mRNA for GTPase-activating protein, complete cds /cds=(296,3424) /gb=AB005666 /gi=2389008 /len=3885 Length = 3885 Score = 85.7 bits (43), Expect = 2e-16 Identities = 49/52 (94%), Positives = 49/52 (94%) Query: 222 aggtcgacggtatcganaagctngatatcgaattcctgcancccgggggatc 273 |||||||||||||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 3838 aggtcgacggtatcgataagcttgatatcgaattcctgcagcccgggggatc 3787 >gnl|UG|Hs.75437 Homo sapiens (clone zap128) mRNA, 3' end of cds /cds=(0,936) /gb=L40401 /gi=887375 /len=1143 Length = 1143 Score = 61.9 bits (31), Expect = 3e-09 Identities = 35/37 (94%), Positives = 35/37 (94%) Query: 222 aggtcgacggtatcganaagctngatatcgaattcct 258 |||||||||||||||| ||||| |||||||||||||| Sbjct: 1143 aggtcgacggtatcgataagcttgatatcgaattcct 1107 Score = 34.2 bits (17), Expect = 0.58 Identities = 19/20 (95%), Positives = 19/20 (95%) Query: 251 gaattcctgcancccggggg 270 ||||||||||| |||||||| Sbjct: 20 gaattcctgcagcccggggg 1 >gnl|UG|Hs.96253 Homo sapiens alpha1A-voltage-dependent calcium channel mRNA, splice form BI-1-Vi-GGCAG, complete cds /cds=(217,7734) /gb=U79666 /gi=2281751 /len=7827 Length = 7827 Score = 60.0 bits (30), Expect = 1e-08 Identities = 34/36 (94%), Positives = 34/36 (94%) Query: 222 aggtcgacggtatcganaagctngatatcgaattcc 257 |||||||||||||||| ||||| ||||||||||||| Sbjct: 7782 aggtcgacggtatcgataagcttgatatcgaattcc 7747 >gnl|UG|Hs.143782 an01f06.x1 Homo sapiens cDNA, 3' end /clone=IMAGE:1684355 /clone_end=3' /gb=AI174238 /gi=3721091 /len=481 Length = 481 Score = 54.0 bits (27), Expect = 6e-07 Identities = 31/33 (93%), Positives = 31/33 (93%) Query: 224 gtcgacggtatcganaagctngatatcgaattc 256 |||||||||||||| ||||| |||||||||||| Sbjct: 1 gtcgacggtatcgataagcttgatatcgaattc 33 >gnl|UG|Hs.75649 H.sapiens 63 kDa protein kinase related to rat ERK3 /cds=(537,2210) /gb=X59727 /gi=23902 /len=4219 Length = 4219 Score = 54.0 bits (27), Expect = 6e-07 Identities = 31/33 (93%), Positives = 31/33 (93%) Query: 225 tcgacggtatcganaagctngatatcgaattcc 257 ||||||||||||| ||||| ||||||||||||| Sbjct: 14 tcgacggtatcgataagcttgatatcgaattcc 46 Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq Posted date: Feb 27, 1999 1:26 AM Number of letters in database: 45,520,635 Number of sequences in database: 62,236 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3257 Number of Sequences: 62236 Number of extensions: 3257 Number of successful extensions: 818 Number of sequences better than 10: 31 length of query: 273 length of database: 45520635 effective HSP length: 17 effective length of query: 256 effective length of database: 44462623 effective search space: 11382431488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 15 (30.2 bits)