BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 301d08 (382 letters) Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq 62,236 sequences; 45,520,635 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Hs.4900 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-... 38 0.053 gnl|UG|Hs.89626 Parathyroid hormone-like hormone /cds=(938,1417... 36 0.21 gnl|UG|Hs.140649 aj63h01.s1 Homo sapiens cDNA, 3' end /clone=IM... 34 0.83 gnl|UG|Hs.116196 af97c06.s1 Homo sapiens cDNA, 3' end /clone=IM... 34 0.83 >gnl|UG|Hs.4900 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-152E5 /cds=(0,1103) /gb=AC004382 /gi=3252819 /len=2105 Length = 2105 Score = 38.2 bits (19), Expect = 0.053 Identities = 19/19 (100%), Positives = 19/19 (100%) Query: 296 tgtggatgtagtttaactc 314 ||||||||||||||||||| Sbjct: 601 tgtggatgtagtttaactc 619 >gnl|UG|Hs.89626 Parathyroid hormone-like hormone /cds=(938,1417) /gb=J03580 /gi=190705 /len=1887 Length = 1887 Score = 36.2 bits (18), Expect = 0.21 Identities = 18/18 (100%), Positives = 18/18 (100%) Query: 353 tcaagtatgttgataaat 370 |||||||||||||||||| Sbjct: 1728 tcaagtatgttgataaat 1745 >gnl|UG|Hs.140649 aj63h01.s1 Homo sapiens cDNA, 3' end /clone=IMAGE:1401169 /clone_end=3' /gb=AA854671 /gi=2942209 /len=357 Length = 357 Score = 34.2 bits (17), Expect = 0.83 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 365 ataaatattgtataaat 381 ||||||||||||||||| Sbjct: 263 ataaatattgtataaat 279 >gnl|UG|Hs.116196 af97c06.s1 Homo sapiens cDNA, 3' end /clone=IMAGE:1055722 /clone_end=3' /gb=AA628120 /gi=2540507 /len=457 Length = 457 Score = 34.2 bits (17), Expect = 0.83 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 94 catttttaaagatttat 110 ||||||||||||||||| Sbjct: 169 catttttaaagatttat 185 Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq Posted date: Feb 27, 1999 1:26 AM Number of letters in database: 45,520,635 Number of sequences in database: 62,236 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6601 Number of Sequences: 62236 Number of extensions: 6601 Number of successful extensions: 1810 Number of sequences better than 10: 18 length of query: 382 length of database: 45520635 effective HSP length: 17 effective length of query: 365 effective length of database: 44462623 effective search space: 16228857395 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 16 (32.2 bits)