BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 055f06 (502 letters) Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq 62,236 sequences; 45,520,635 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Hs.101047 Transcription factor 3 (E2A immunoglobulin enh... 38 0.070 gnl|UG|Hs.154658 H.sapiens mRNA from TYL gene /cds=(1806,3743) ... 36 0.28 gnl|UG|Hs.54489 H.sapiens cylicin mRNA /cds=(0,1797) /gb=Z22780... 34 1.1 gnl|UG|Hs.162985 zj90f12.s1 Homo sapiens cDNA, 3' end /clone=46... 34 1.1 gnl|UG|Hs.105537 nf80d05.s1 Homo sapiens cDNA, 3' end /clone=IM... 34 1.1 >gnl|UG|Hs.101047 Transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) /cds=(30,1994) /gb=M31523 /gi=339477 /len=4396 Length = 4396 Score = 38.2 bits (19), Expect = 0.070 Identities = 19/19 (100%), Positives = 19/19 (100%) Query: 319 ttctcttggttttgtcatg 337 ||||||||||||||||||| Sbjct: 2840 ttctcttggttttgtcatg 2858 >gnl|UG|Hs.154658 H.sapiens mRNA from TYL gene /cds=(1806,3743) /gb=X99688 /gi=1480102 /len=4307 Length = 4307 Score = 36.2 bits (18), Expect = 0.28 Identities = 18/18 (100%), Positives = 18/18 (100%) Query: 483 gaacacacaactgaaaga 500 |||||||||||||||||| Sbjct: 1887 gaacacacaactgaaaga 1870 >gnl|UG|Hs.54489 H.sapiens cylicin mRNA /cds=(0,1797) /gb=Z22780 /gi=396104 /len=1913 Length = 1913 Score = 34.2 bits (17), Expect = 1.1 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 294 ttcttgaatcatttctt 310 ||||||||||||||||| Sbjct: 998 ttcttgaatcatttctt 982 >gnl|UG|Hs.162985 zj90f12.s1 Homo sapiens cDNA, 3' end /clone=462191 /clone_end=3' /gb=AA705435 /len=390 Length = 390 Score = 34.2 bits (17), Expect = 1.1 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 34 tggcactttgggagatt 50 ||||||||||||||||| Sbjct: 101 tggcactttgggagatt 85 >gnl|UG|Hs.105537 nf80d05.s1 Homo sapiens cDNA, 3' end /clone=IMAGE:926217 /clone_end=3' /gb=AA534456 /gi=2278709 /len=593 Length = 593 Score = 34.2 bits (17), Expect = 1.1 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 297 ttgaatcatttcttcat 313 ||||||||||||||||| Sbjct: 16 ttgaatcatttcttcat 32 Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq Posted date: Feb 27, 1999 1:26 AM Number of letters in database: 45,520,635 Number of sequences in database: 62,236 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11411 Number of Sequences: 62236 Number of extensions: 11411 Number of successful extensions: 4362 Number of sequences better than 10: 20 length of query: 502 length of database: 45520635 effective HSP length: 17 effective length of query: 485 effective length of database: 44462623 effective search space: 21564372155 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 16 (32.2 bits)