BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 01626 (352 letters) Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq 62,236 sequences; 45,520,635 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Hs.121990 zj04h06.s1 Homo sapiens cDNA, 3' end /clone=44... 72 3e-12 gnl|UG|Hs.113023 ye93c07.s1 Homo sapiens cDNA, 3' end /clone=IM... 36 0.19 gnl|UG|Hs.133095 om73d07.s1 Homo sapiens cDNA, 3' end /clone=IM... 32 3.0 gnl|UG|Hs.97393 Human mRNA for KIAA0328 gene, partial cds /cds=... 32 3.0 gnl|UG|Hs.105039 zu38h10.r1 Homo sapiens cDNA, 5' end /clone=IM... 32 3.0 >gnl|UG|Hs.121990 zj04h06.s1 Homo sapiens cDNA, 3' end /clone=449339 /clone_end=3' /gb=AA777920 /len=456 Length = 456 Score = 71.9 bits (36), Expect = 3e-12 Identities = 42/44 (95%), Positives = 42/44 (95%) Query: 123 tttctttatttacatttcaaatgttatttcctttcctggtttcc 166 ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 27 tttctttatttacatttcaaatgttatcccctttcctggtttcc 70 Score = 40.1 bits (20), Expect = 0.012 Identities = 50/60 (83%), Positives = 50/60 (83%) Query: 284 caggaccaagggcttctccttccactggtgcccaacaatgccatcctctgctatatatgc 343 ||||||||||||| |||||| ||| || || | || | |||||||||||||| |||||| Sbjct: 173 caggaccaagggcctctcctcccattgatgacggactaggccatcctctgctacatatgc 232 >gnl|UG|Hs.113023 ye93c07.s1 Homo sapiens cDNA, 3' end /clone=IMAGE:125292 /clone_end=3' /gb=R05789 /gi=756409 /len=455 Length = 455 Score = 36.2 bits (18), Expect = 0.19 Identities = 21/22 (95%), Positives = 21/22 (95%) Query: 304 tccactggtgcccaacaatgcc 325 ||||||| |||||||||||||| Sbjct: 95 tccactgctgcccaacaatgcc 116 >gnl|UG|Hs.133095 om73d07.s1 Homo sapiens cDNA, 3' end /clone=IMAGE:1552813 /clone_end=3' /gb=AA927777 /gi=3076597 /len=531 Length = 531 Score = 32.2 bits (16), Expect = 3.0 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 136 atttcaaatgttattt 151 |||||||||||||||| Sbjct: 302 atttcaaatgttattt 287 >gnl|UG|Hs.97393 Human mRNA for KIAA0328 gene, partial cds /cds=(0,4985) /gb=AB002326 /gi=2224596 /len=6411 Length = 6411 Score = 32.2 bits (16), Expect = 3.0 Identities = 16/16 (100%), Positives = 16/16 (100%) Query: 124 ttctttatttacattt 139 |||||||||||||||| Sbjct: 6122 ttctttatttacattt 6107 >gnl|UG|Hs.105039 zu38h10.r1 Homo sapiens cDNA, 5' end /clone=IMAGE:740323 /clone_end=5' /gb=AA477819 /gi=2206453 /len=513 Length = 513 Score = 32.2 bits (16), Expect = 3.0 Identities = 19/20 (95%), Positives = 19/20 (95%) Query: 122 gtttctttatttacatttca 141 |||||||| ||||||||||| Sbjct: 257 gtttctttctttacatttca 238 Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq Posted date: Feb 27, 1999 1:26 AM Number of letters in database: 45,520,635 Number of sequences in database: 62,236 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6980 Number of Sequences: 62236 Number of extensions: 6980 Number of successful extensions: 1933 Number of sequences better than 10: 14 length of query: 352 length of database: 45520635 effective HSP length: 17 effective length of query: 335 effective length of database: 44462623 effective search space: 14894978705 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 16 (32.2 bits)