BLASTN 2.0.5 [May-5-1998] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 00141 (398 letters) Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq 62,236 sequences; 45,520,635 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gnl|UG|Hs.52002 Human scavenger receptor cysteine rich Sp alpha... 38 0.055 gnl|UG|Hs.102607 yy78c05.s1 Homo sapiens cDNA, 3' end /clone=IM... 34 0.86 gnl|UG|Hs.163607 tf93e11.x1 Homo sapiens cDNA, 3' end /clone=IM... 34 0.86 gnl|UG|Hs.159692 th02a05.x1 Homo sapiens cDNA, 3' end /clone=IM... 34 0.86 >gnl|UG|Hs.52002 Human scavenger receptor cysteine rich Sp alpha mRNA, complete cds /cds=(60,1103) /gb=U82812 /gi=2702313 /len=2166 Length = 2166 Score = 38.2 bits (19), Expect = 0.055 Identities = 19/19 (100%), Positives = 19/19 (100%) Query: 170 tacatttacacatttacac 188 ||||||||||||||||||| Sbjct: 2105 tacatttacacatttacac 2123 >gnl|UG|Hs.102607 yy78c05.s1 Homo sapiens cDNA, 3' end /clone=IMAGE:279656 /clone_end=3' /gb=N48975 /gi=1190141 /len=433 Length = 433 Score = 34.2 bits (17), Expect = 0.86 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 256 aaaatatcatcatgaat 272 ||||||||||||||||| Sbjct: 91 aaaatatcatcatgaat 107 >gnl|UG|Hs.163607 tf93e11.x1 Homo sapiens cDNA, 3' end /clone=IMAGE:2106860 /clone_end=3' /gb=AI391598 /len=501 Length = 501 Score = 34.2 bits (17), Expect = 0.86 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 249 aaactagaaaatatcat 265 ||||||||||||||||| Sbjct: 298 aaactagaaaatatcat 282 >gnl|UG|Hs.159692 th02a05.x1 Homo sapiens cDNA, 3' end /clone=IMAGE:2117072 /clone_end=3' /gb=AI416956 /len=495 Length = 495 Score = 34.2 bits (17), Expect = 0.86 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 246 ttgaaactagaaaatat 262 ||||||||||||||||| Sbjct: 462 ttgaaactagaaaatat 446 Database: /ddhome/DDsys/GenDB/UniGeneHs/Hs.seq.uniq Posted date: Feb 27, 1999 1:26 AM Number of letters in database: 45,520,635 Number of sequences in database: 62,236 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7250 Number of Sequences: 62236 Number of extensions: 7250 Number of successful extensions: 2016 Number of sequences better than 10: 22 length of query: 398 length of database: 45520635 effective HSP length: 17 effective length of query: 381 effective length of database: 44462623 effective search space: 16940259363 T: 0 A: 0 X1: 6 (11.9 bits) X2: 25 (49.6 bits) S1: 0 ( 0.5 bits) S2: 16 (32.2 bits)